Bacterial Pathogen Resources
PA14 Genomic Sequence
Pseudomonas aeruginosa is an important soil bacterium, with a
complex metabolism capable of degrading polycyclic aromatic hydrocarbons,
and producing interesting, biologically active secondary metabolites
including quinolones, rhamnolipids, lectins, hydrogen cyanide, and
phenazines. Production of these products is likely controled by complex
regulatory networks making Pseudomonas aeruginosa adaptable both to
free-living and pathogenic lifestyles. The complexity of its metabolism is
reflected in a relatively large genome size (about 6.5 Mb). The sequence
for P. aeruginosa strain PAO1 can be accessed
here. We have
sequenced the more
virulent strain, PA14, as described
here. The
current assembly consists of a single 6.54 Mb contig, available for download.
A draft version of the PA14 annotation will be posted here when available.
PA14 Mutant Library
One of the major products of the MGH PGA program will be a library of
transposon
mutants in the genes of Pseudomonas
aeruginosa. Our specific strategy is to randomly mutagenize P.
aeruginosa strain PA14 with transposons TnphoA and Mariner, determine
the sites of insertion of approximately 30,000 mutants, and from this
collection, choose a subset corresponding to a single transposon insertion
in each annotated non-essential gene. As part of our ongoing transposon
mutant sequencing project, we are making available a searchable database
of transposon mutants of non-essential PA14 genes. This tool provides an
interface by which researchers can search the transposon insertion mutant
libraries for mutants in a given gene. If desired, a comprehensive list
of identified mutants can be downloaded. Mutants of interest from the
library can be ordered through the on-line Mutant
Request interface
PowerPoint Presentations
The following PowerPoint presentations are available for online viewing or
download.
- An overview of the Host-Pathogen Interactions project.
HTML
and
PowerPoint.
- PA14 Sequence Analysis. (New presentation)
HTML
and
PowerPoint.
- PA14 Mutant Library. (New Presentation)
HTML
and
PowerPoint.
- CF Mouse Models. (New Presentation)
HTML
and
PowerPoint.
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