PrimerBank

The following primer pair is found for 31981070a1

Gene Descriptions:
NCBI GeneID 56632
GenBank Accession
NCBI Protein Accession NP_001166032
Species Mouse
Coding DNA Length 1854
Gene Description Mus musculus sphingosine kinase 2 (Sphk2), transcript variant 3, mRNA.

Primer Pair Descriptions:
PrimerBank ID 31981070a1
Validation Results  (Click here to view experimental validation data: amplification plots, dissociation curves, 2% agarose gel analysis, sequencing and BLAST data)
Amplicon Size 100
Sequence (5' -> 3') Length Tm Location
Forward Primer CACGGCGAGTTTGGTTCCTA 20 62.1 49-68
Reverse Primer CTTCTGGCTTTGGGCGTAGT 20 62.2 148-129
Location in Coding Sequence (primers and amplicon highlighted)
    1 atggccccac caccactact gccagtggct gccagcactc caatcctgca cggcgagttt
   61 ggttcctacc cggccaacgg cccacggttt gccctcaccc tcacaacaca agccctacac
  121 atacagcgac tacgcccaaa gccagaagcc cggccccgag atggtctagt ctctctggat
  181 gaggtctcgg gctgtggcac cctgcagagc cgtagccccg aggacactgc agcctacttc
  241 tgcatctaca cctacccacg tggccgtcga gggggccggc gcagagctac gcggaccttc
  301 cgggcggatg gggccaccac ttatgaggag aatcgtgcag aggcccagcg ctgggccact
  361 gccctcacgt gtctcctccg aggagtgcct ctgtcagggg accaggaaat cacccctgaa
  421 ttgctgcccc ggaagcccag gctgctcata ttggtcaatc cctttggggg gcggggcctg
  481 gcctggcagc gctgtatgga ccacgtggtg ccaatgatct ctgaagctgg gctgtccttc
  541 aacctcatac agacagaacg acagaaccat gcccgtgagc tggtgcaggg gttaagcctg
  601 agtgagtggg aaggcattgt cactgtgtct ggagacgggc tgctttacga ggtgctgaat
  661 gggctccttg atcggccaga ctgggaggat gccgtgcgga tgcccattgg tgtcctcccc
  721 tgtggatcgg gcaatgcgct agctggggcg gtgaaccatc atggcgggtt tgagcaggtt
  781 gtcggtgttg acctgttgct caactgctcg cttcttctct gccgtggtgg cagccatcct
  841 ctggacctgc tctctgtgac gctagcctcg ggatcccgct gtttttcctt cctgtcagtg
  901 gcctggggat tcttgtcaga tgtggacatt cacagtgagc gcttcagggc cctgggcagc
  961 gctcgattca cactgggtgc agtgctaggc ctggcctcgt tgcataccta ccgtggacgc
 1021 ctctcctacc tccccgctac cacagaacca gccttgccca tcccaggcca cagtctgcct
 1081 cgagccaagt cagaactagt cttggctcca gccccagccc ccgccgccac ccactcgcct
 1141 ctacatcgat ctgtgtctga cctgcccctg ccccttcccc agcctgcctt ggtctcccct
 1201 ggctcccctg agcccctgcc tgacctgtcc ctcaatggtg gtggtccaga gctgactgga
 1261 gactggggag gagctgggga tgcacctctg tccccagacc cactgctgcc ttcatccccc
 1321 aacgctctca aaacagctca gctttcaccc atcgctgaag ggcccccaga aatgccagca
 1381 tcttcggggt tcctgcctcc cacccacagt gccccagaag cctctacctg gggcccagtg
 1441 gaccacctcc tccctcccct gggctctcca ctgccccaag actgggtgac aatagagggg
 1501 gagtttgtac tcatgttggg catcttgccg agccacctct gcgcagacct gatggcagcc
 1561 ccacatgcac gctttgatga tggcgttgtg cacctgtgtt gggtgcggag cggcatctca
 1621 cgggctgcac ttctacgcat tttgctggcc atggagcatg gaaaccactt cagcctgggc
 1681 tgcccccatc tgggctatgc tgcagcacgt gccttccgcc ttgaaccact cacgcctcgt
 1741 ggcctgctca ctgtagatgg ggagttagtg gagtatgggc caatacaggc gcaggtgcac
 1801 ccaggtctcg ccacgctgct cactgggcct gcaggtcaaa agccacaagc ctga