Primer Pair Descriptions: |
PrimerBank ID |
23956044a1 |
Validation Results  (Click here to view experimental validation data: amplification plots, dissociation curves, 2% agarose gel analysis, sequencing and BLAST data) |
Amplicon Size |
159 |
|
Sequence (5' -> 3') |
Length |
Tm |
Location |
Forward Primer |
CCAGCTCCCCATTAGCTCTG |
20 |
61.8 |
50-69 |
Reverse Primer |
GCACTTGCCTCTTTAGGAAGTC |
22 |
60.9 |
208-187 |
Location in Coding Sequence (primers and amplicon highlighted) |
1 atgggaccag cttcagggtc ccagctacta gtgctactgc tgctgttggc cagctcccca
61 ttagctctgg ggatccccat gtattccatc attactccca atgtcctacg gctggagagc
121 gaagagacca tcgtactgga ggcccacgat gctcagggtg acatcccagt cacagtcact
181 gtgcaagact tcctaaagag gcaagtgctg accagtgaga agacagtgtt gacaggagcc
241 agtggacatc tgagaagcgt ctccatcaag attccagcca gtaaggaatt caactcagat
301 aaggaggggc acaagtacgt gacagtggtg gcaaacttcg gggaaacggt ggtggagaaa
361 gcagtgatgg taagcttcca gagtgggtac ctcttcatcc agacagacaa gaccatctac
421 acccctggct ccactgtctt atatcggatc ttcactgtgg acaacaacct actgcccgtg
481 ggcaagacag tcgtcatcct cattgagacc cccgatggca ttcctgtcaa gagagacatt
541 ctgtcttcca acaaccaaca cggcatcttg cctttgtctt ggaacattcc tgaactggtc
601 aacatggggc agtggaagat ccgagccttt tacgaacatg cgccgaagca gatcttctcc
661 gcagagtttg aggtgaagga atacgtgctg cccagttttg aggtccgggt ggagcccaca
721 gagacatttt attacatcga tgacccaaat ggcctggaag tttccatcat agccaagttc
781 ctgtacggga aaaacgtgga cgggacagcc ttcgtgattt ttggggtcca ggatggcgat
841 aagaagattt ctctggccca ctccctcacg cgcgtagtga ttgaggatgg tgtgggggat
901 gcagtgctga cccggaaggt gctgatggag ggggtacggc cttccaacgc cgacgccctg
961 gtggggaagt ccctgtatgt ctccgtcact gtcatcctgc actcaggtag tgacatggta
1021 gaggcagagc gcagtgggat cccgattgtc acttccccgt accagatcca cttcaccaag
1081 acacccaaat tcttcaagcc agccatgccc tttgacctca tggtgttcgt gaccaacccc
1141 gatggctctc cggccagcaa agtgctggtg gtcactcagg gatctaatgc aaaggctctc
1201 acccaagatg atggcgtggc caagctaagc atcaacacac ccaacagccg ccaacccctg
1261 accatcacag tccgcaccaa gaaggacact ctcccagaat cacggcaggc caccaagaca
1321 atggaggccc atccctacag cactatgcac aactccaaca actacctaca cttgtcagtg
1381 tcacgaatgg agctcaagcc gggggacaac ctcaatgtca acttccacct gcgcacagac
1441 ccaggccatg aggccaagat ccgatactac acctacctgg ttatgaacaa ggggaagctc
1501 ctgaaggcag gccgccaggt tcgggagcct ggccaggacc tggtggtctt gtccctgccc
1561 atcactccag agtttattcc ttcatttcgc ctggtggctt actacaccct gattggagct
1621 agtggccaga gggaggtggt ggctgactct gtgtgggtgg atgtgaagga ttcctgtatt
1681 ggcacgctgg tggtgaaggg tgacccaaga gataaccatc tcgcacctgg gcaacaaacg
1741 acactcagga ttgaaggaaa ccagggggcc cgagtggggc tagtggctgt ggacaaggga
1801 gtgtttgtgc tgaacaagaa gaacaaactc acacagagca agatctggga tgtggtagag
1861 aaggcagaca ttggctgcac cccaggcagt gggaagaact atgctggtgt cttcatggat
1921 gcaggcctgg ccttcaagac aagccaagga ctgcagactg aacagagagc agatcttgag
1981 tgcaccaagc cagcagcccg ccgccgtcgc tcagtacagt tgatggaaag aaggatggac
2041 aaagctggtc agtacactga caagggtctt cggaagtgtt gtgaggatgg tatgcgggat
2101 atccctatga gatacagctg ccagcgccgg gcacgcctca tcacccaggg cgagaactgc
2161 ataaaggcct tcatagactg ctgcaaccac atcaccaagc tgcgtgaaca acacagaaga
2221 gaccacgtgc tgggcctggc caggagtgaa ttggaggaag acataattcc agaagaagat
2281 attatctcta gaagccactt cccacagagc tggttgtgga ccatagaaga gttgaaagaa
2341 ccagagaaaa atggaatctc tacgaaggtc atgaacatct ttctcaaaga ttccatcacc
2401 acctgggaga ttctggcagt gagcttgtca gacaagaaag ggatctgtgt ggcagacccc
2461 tatgagatca gagtgatgca ggacttcttc attgacctgc ggctgcccta ctctgtagtg
2521 cgcaacgaac aggtggagat cagagctgtg ctcttcaact accgtgaaca ggaggaactt
2581 aaggtgaggg tggaactgtt gcataatcca gccttctgca gcatggccac cgccaagaat
2641 cgctacttcc agaccatcaa aatccctccc aagtcctcgg tggctgtacc gtatgtcatt
2701 gtccccttga agatcggcca acaagaggtg gaggtcaagg ctgctgtctt caatcacttc
2761 atcagtgatg gtgtcaagaa gacactgaag gtcgtgccag aaggaatgag aatcaacaaa
2821 actgtggcca tccatacact ggacccagag aagctcggtc aagggggagt gcagaaggtg
2881 gatgtgcctg ccgcagacct tagcgaccaa gtgccagaca cagactctga gaccagaatt
2941 atcctgcaag ggagcccggt ggttcagatg gctgaagatg ctgtggacgg ggagcggctg
3001 aaacacctga tcgtgacccc cgcaggctgt ggggaacaga acatgattgg catgacacca
3061 acagtcattg cggtacacta cctggaccag accgaacagt gggagaagtt cggcatagag
3121 aagaggcaag aggccctgga gctcatcaag aaagggtaca cccagcagct ggccttcaaa
3181 cagcccagct ctgcctatgc tgccttcaac aaccggcccc ccagcacctg gctgacagcc
3241 tacgtggtca aggtcttctc tctagctgcc aacctcatcg ccatcgactc tcacgtcctg
3301 tgtggggctg ttaaatggtt gattctggag aaacagaagc cggatggtgt ctttcaggag
3361 gatgggcccg tgattcacca agaaatgatt ggtggcttcc ggaacgccaa ggaggcagat
3421 gtgtcactca cagccttcgt cctcatcgca ctgcaggaag ccagggacat ctgtgagggg
3481 caggtcaata gccttcctgg gagcatcaac aaggcagggg agtatattga agccagttac
3541 atgaacctgc agagaccata cacagtggcc attgctgggt atgccctggc cctgatgaac
3601 aaactggagg aaccttacct cggcaagttt ctgaacacag ccaaagatcg gaaccgctgg
3661 gaggagcctg accagcagct ctacaacgta gaggccacat cctacgccct cctggccctg
3721 ctgctgctga aagactttga ctctgtgccc cctgtagtgc gctggctcaa tgagcaaaga
3781 tactacggag gcggctatgg ctccacccag gctaccttca tggtattcca agccttggcc
3841 caatatcaaa cagatgtccc tgaccataag gacttgaaca tggatgtgtc cttccacctc
3901 cccagccgta gctctgcaac cacgtttcgc ctgctctggg aaaatggcaa cctcctgcga
3961 tcggaagaga ccaagcaaaa tgaggccttc tctctaacag ccaaaggaaa aggccgaggc
4021 acattgtcgg tggtggcagt gtatcatgcc aaactcaaaa gcaaagtcac ctgcaagaag
4081 tttgacctca gggtcagcat aagaccagcc cctgagacag ccaagaagcc cgaggaagcc
4141 aagaatacca tgttccttga aatctgcacc aagtacttgg gagatgtgga cgccactatg
4201 tccatcctgg acatctccat gatgactggc tttgctccag acacaaagga cctggaactg
4261 ctggcctctg gagtagatag atacatctcc aagtacgaga tgaacaaagc cttctccaac
4321 aagaacaccc tcatcatcta cctagaaaag atttcacaca ccgaagaaga ctgcctgacc
4381 ttcaaagttc accagtactt taatgtggga cttatccagc ccgggtcggt caaggtctac
4441 tcctattaca acctcgagga atcatgcacc cggttctatc atccagagaa ggacgatggg
4501 atgctcagca agctgtgcca cagtgaaatg tgccggtgtg ctgaagagaa ctgcttcatg
4561 caacagtcac aggagaagat caacctgaat gtccggctag acaaggcttg tgagcccgga
4621 gtcgactatg tgtacaagac cgagctaacc aacatagagc tgttggatga ttttgatgag
4681 tacaccatga ccatccagca ggtcatcaag tcaggctcag atgaggtgca ggcagggcag
4741 caacgcaagt tcatcagcca catcaagtgc agaaacgccc tgaagctgca gaaagggaag
4801 aagtacctca tgtggggcct ctcctctgac ctctggggag aaaagcccaa caccagctac
4861 atcattggga aggacacgtg ggtggagcac tggcctgagg cagaagaatg ccaggatcag
4921 aagtaccaga aacagtgcga agaacttggg gcattcacag aatctatggt ggtttatggt
4981 tgtcccaact ga |